Year 2021
type	theme				author, title, journal, volume, page, year	PDF
paper	A				Kenji Okubo and Kunihiko Kaneko
title	4				Heterosis Related to Fitness and Phenotypic Variance in the Evolution of Diploid Gene Regulatory Network	https://www.bio
					submitted
paper	A				Y.J.Matsubara, N. Takeuchi, K.Kaneko
title	2				Error Catastrophe Is Avoided by Proofreading Innate to Template-Directed Polymerization	https://arxiv.org/abs/2108.09961
					submitted
paper	A				Y. Matsushita, T.S. Hatakeyamna, K.Kaneko
title	1				Dynamical-systems theory of cellular reprogramming	https://journals.
					Physical Review Research 4 (2022), L022008
paper	A				Takeshi Sugawara and Kunihiko Kaneko
title	5				Chemophoresis Engine: Universal Principle of ATPase-driven Cargo Transport
					Submitted
paper			C		Yuma Fujimoto and Kunihiko Kaneko
title			4		Exploitation by asymmetry of information reference in coevolutionary learning in prisoner's dilemma game	https://doi.org/10.1093/genetics/iyab182
					Journal of Physics: Complexity 2.4 (2021): 045007
paper	A				Qian-Yuan Tang and Kunihiko Kaneko
title	4				Dynamics-evolution correspondence in protein structures	https://journals.
					Phys. Rev. Lett. 127, 098103 (2021)
paper			C		Kenji Itao and Kunihiko Kaneko
title			4		Emergence of Kinship Structures and Descent Systems: Multi-level Evolutionary Simulation and Empirical Data Analyses	https://royalsoc
					Proceedings of the Royal Society B 289 (2022), 20212641
paper	A				Naoto Nishiura and Kunihiko Kaneko
title	4				Evolution of phenotypic fluctuation under host-parasite interactions	https://journals.
					PLOS Computational Biology 17.11 (2021): e1008694
paper	A				Kenji Okubo and Kunihiko Kaneko
title	4				Evolution of dominance in gene expression pattern associated with phenotypic robustness	https://bmcecol
					BMC Ecology and Evolution, 21(2021)110
paper	A				Masayo Inoue, Kunihiko Kaneko
title	3				"Entangled gene regulatory networks with cooperative expression endow robust adaptive responses to unforeseen environmental changes"	https://journals.
	4				Phys. Rev. Research 3, 033183
paper	A				Tetsuhiro S. Hatakeyama, Kunihiko Kaneko
title	3				"A Linear Reciprocal Relationship Between Robustness and Plasticity in Homeostatic Biological Networks"	https://arxiv.org/abs/2012.04860
	4				Submitted
paper	A				Jumpei F. Yamgishi, Nen Saito, Kunihiko Kaneko
title	4				Adaptation of metabolite leakiness leads to symbiotic chemical exchange and to a resilient microbial ecosystem	https://journals.
					PLoS Computational Biology 17(2021): e1009143
paper			C		Kohei Ichikawa and Kunihiko Kaneko
title			1		Short term memory by transient oscillatory dynamics in recurrent neural networks	https://journals.
					Phys. Rev. Research 3, 033193 (2021)
paper			C		Kenji Itao, Kunihiko Kaneko
title			4		Evolution of family systems and resultant socio-economic structures	https://www.nature.com/articles/s41599-021-00919-2
					Humanities and Social Sciences Communications 8.1 (2021): 1-11.
paper	A				Arisa H. Oda, Miki Tamura, Kunihiko Kaneko, Kunihiro Ohta, Tetsuhiro S. Hatakeyama
title	3				Autotoxin-mediated voluntary triage in starved yeast community	https://www.bio
					submitted
paper			C		T.Kurikawa and K.Kaneko
title			1		“Multiple-Timescale Neural Networks: Generation of History-Dependent Sequences and Inference Through Autonomous Bifurcations”	https://doi.org/10.3389/fncom.2021.743537
					Frontiers in Computational Neuroscience 15 (2021) 743537.
paper	A				N.Takeuchi, N. Mitarai, K. Kaneko
title	2				A scaling law of multilevel evolution: how the balance between within- and among-collective evolution is determined	https://doi.org/10.1093/genetics/iyab182
	4				Genetics 220 (2022), iyab182
Review	A				T. Kohsokabe and K. Kaneko
title	1				"Dynamical Systems Approach to Evolution-Development Congruence: Revisiting Haeckel’s Recapitulation Theory"	https://doi.org/10.1002/jez.b.23031
	4				Journal of Experimental Zoology Part B: Molecular and Developmental Evolution　338(2022)62-75
Review	A				C.Furusawa & K. Kaneko
title	4				"Direction and Constraint in Phenotypic Evolution: Dimension Reduction and Global Proportionality in Phenotype Fluctuation and Responses"	https://link.sprin
					Evolutionary Systems Biology (ed. A. Crombach), pp35-58
Year 2020
type	theme				author, title, journal, volume, page, year	PDF
paper	A				Q-Y. Tang, T.Hatakeyama, K. Kaneko
title	4				Functional Sensitivity and Mutational Robustness of Proteins	https://journals.
					Physical Review Research 2 (3), 033452(2020)
paper	A				Ayaka Sakata and Kunihiko Kaneko
title	4				"Dimensional reduction in evolving spin-glass model: correlation of phenotypic responses to environmental and mutational changes"	https://journals.
					Phys.Rev.Lett. 124, (2020) 218101
paper	A				Qian-YuanTang and Kunihiko Kaneko
title	4				"Long-range Correlation in Protein Dynamics: Confirmation by Structural Data and Normal Mode Analysis"	https://journals.
					PLoS Comp. Biol., 16 (2), e1007670 (2020)
paper	A				Y.Matsushita, & K.Kaneko
title	1				"Homeorhesis in Waddington's Landscape by Epigenetic Feedback Regulation"	https://journals.
					Phys. Rev. Research 2, 023083(2020)
paper				D	J.F. Yamagishi and K. Kaneko
title				1	"Chaos with a High-dimensional Torus"	https://journals.
				4	Physical Review Research 2, 023044(2020)
paper	A				Sato, T. U., and Kaneko, K.
title	2				"Evolutionary dimension reduction in phenotypic space"	https://journals.
	4				Phys. Rev. Research, 2 (1), 013197 (2020)
paper			C		K.Itao and K. Kaneko
title			4		"Evolution of Kinship Structures Driven by Marriage Tie and Competition"	https://www.pnas.org/content/117/5/2378.short
					PNAS, 117 (5), 2378-2384 (2020)
paper			C		Tomoki Kurikawa, Omri Barak, Kunihiko Kaneko
title			1		"Repeated sequential learning increases memory capacity via effective decorrelation in a recurrent neural network"	https://journals.
					Phys. Rev. Research 2 (2020) 023307
paper	A				J.F. Yamagishi, N. Saito and K. Kaneko
title	3				"Advantage of Leakage of Essential Metabolites for Cells"	https://journals.
	4				Phys. Rev. Lett. 124, 048101 (2020)
paper	A				Y. Himeoka, K. Kaneko
title	3				"Epigenetic Ratchet: Spontaneous Adaptation via Stochastic Gene Expression"	https://www.nature.com/articles/s41598-019-57372-0
					Scientific Reports, 10, 459 (2020)
paper	A				T.S. Hatakeyama, K. Kaneko
title	3				"Transition in relaxation paths in allosteric molecules: Enzymatic kinetically constrained model"	https://journals.
					Phys. Rev. Research 2, 012005(R) (2020)
comment			C		K.Itao and K.Kaneko
title			4		"Reply to Read and Parkin: Our model correctly expresses the ethnographic nature of the cultural incest taboo and kinship structures"	https://www.pnas.org/content/117/17/9167
					Proceedings of National Academy of Sciences (USA), Letter 117, 9167-9168 (2020)
Year 2019
type	theme				author, title, journal, volume, page, year	PDF
paper	A				Nobuto Takeuchi, Kunihiko Kaneko
title	2				"The origin of the central dogma through conflicting multilevel selection"	https://doi.org/10.1098/rspb.2019.1359
	4				Proc. R. Soc. B, 286: 20191359.　（2019）
paper			C		Y.Fujimoto, K. Kaneko
title			2		"Emergence of Exploitation as Symmetry Breaking in Iterated Prisoner's Dilemma"	https://journals.
			4		Phys.Rev.Research. 1,(2019) 033077
paper	A				Atsushi Kamimura, Kunihiko Kaneko
title	2				"Molecular Diversity and Network Complexity in Growing Protocells"	https://www.mdpi.com/2075-1729/9/2/53
	4				Life (2019)9,53
paper	A				A. Kamimura, Y.J. Matsubara, K. Kaneko, and N. Takeuchi
title	2				"Horizontal transfer between loose compartments stabilizes replication of fragmented ribozymes"	https://journals.
	4				PLoS Comp. Biol. e15(2019) e1007094
paper	A		C		E.Nakamura and K. Kaneko
title	4		4		"Statistical Evolutionary Laws in Music Styles"	https://www.nature.com/articles/s41598-019-52380-6
					Scientific Reports, vol. 9, No. 15993, pp. 1-11, 2019
paper			C		Y. Fujimoto, K. Kaneko
title			2		Functional Dynamics by Intention Recognition in Iterated Games	https://iopscien
			4		New J. Phys. 21, 023025 (2019)
解説					金子邦彦，　古澤力
title					適応と進化におけるマクロ現象論――表現型変化の低次元拘束と揺らぎ‒応答関係	https://www.jps.or.jp/books/gakkaishi/2019/03/74-3.php
					日本物理学会誌、第74巻第3号、137頁 (2019)
Year 2018
type	theme				author, title, journal, volume, page, year	PDF
paper	A				M. Inoue, K. Kaneko
title	3				"Cooperative reliable response from sloppy gene-expression dynamics"	http://iopscienc
					EPL, 124, 38002(2018)
paper	A				Y. J. Matsubara and K. Kaneko
title	2				"Kinetic selection of template polymer with complex sequences"	https://journals.
					Phys. Rev. Lett. 121, 118101 (2018)
paper				D	Y. Yamaguchi and K. Kaneko
title				2	"Collective 1/f fluctuation by pseudo-Casimir invariants"	https://journals.
				4	Phys. Rev. E 98, 020201(R)(2018)
paper	A				A.Kamimura　and K. Kaneko
title	2				"Exponential growth for self-reproduction in a catalytic reaction network: relevance of a minority molecular species and crowdedness"	http://iopscienc
					New J. Phys. 20 (2018) 035001
paper		B			T,Kohsokabe and K. Kaneko
title		2			"Boundary-Induced Pattern Formation from Uniform Temporal Oscillation"	https://arxiv.org/abs/1711.07675
					Chaos 28, 045110 (2018)
paper	A				K. Kaneko and C. Furusawa
title	4				"Macroscopic Theory for Evolving Biological Systems Akin to Thermodynamics"	https://www.an
					Ann. Rev. Biophys, 47(2018) 273-290
paper	A				C. Furusawa and K. Kaneko
title	4				"Formation of Dominant Mode by Evolution in Biological Systems"	http://biorxiv.org/content/early/2017/04/07/125278
					Phys. Rev. E 97, 042410 (2018)
Year 2017
type	theme				author, title, journal, volume, page, year	PDF
paper	A				Masahiko Ueda; Nobuto Takeuchi; Kunihiko Kaneko
title	4				"Stronger selection can slow down evolution driven by recombination on a smooth fitness landscape"	https://doi.org/10.1371/journal.pone.0183120
					PLoS ONE12(8): e0183120 (2017)
paper	A				N. Takeuchi, P. Hogeweg, K. Kaneko
title	2				"The origin of a primordial genome through spontaneous symmetry breaking"	https://www.nature.com/articles/s41467-017-00243-x
					Nature Communications 8 (1), 250 (2017)
paper	A				N. Takeuchi, P. Hogeweg, K. Kaneko
title	2				"Conceptualizing the Origin of Life in terms of Evolution"	http://rsta.royal
					Phil. Trans. R. Soc. A 375 (2109), 20160346 (2017)
paper	A				Tetsuhiro S. Hatakeyama and Kunihiko Kaneko
title	3				"Robustness of spatial patterns in buffered reaction-diffusion systems and its reciprocity with phase plasticity"	https://journals.
					Phys. Rev. E., Rapid Communication,　95, 030201(R) (2017)
paper	A				Yusuke Himeoka and Kunihiko Kaneko
title	2				"Theory for transitions between log and stationary phases: universal laws for lag time"	https://journals.
					Phys. Rev. X 7, 021049 (2017)
paper			C		Yuma Fujimoto, Takahiro Sagawa and Kunihiko Kaneko
title			4		"Hierarchical prisoner’s dilemma in hierarchical game for resource competition"	http://iopscienc
					New J. Phys. 19 (2017) 073008
paper	A			D	Nen Saito and Kunihiko Kaneko
title	5			5	"Embedding dual function into molecular motors through collective motion"	https://www.nat
					Scientific Reports 7, 44288 (2017)
paper	A				J.T.Young,　T.S.Hatakeyama,　K.　Kaneko
title	3				"Dynamics Robustness of Linear Signaling Cascades"	http://journals.p
					PLoS Comput Biol 13(3): e1005434
paper	A				K. Kamino, Y. Kondo, A. Nakajima, M. Honda-Kitahara, K. Kaneko, and S. Sawai
title	3				"Fold-change detection and scale invariance of cell–cell signaling in social amoeba"	http://www.pnas.org/content/114/21/E4149.abstract
					PNAS, 114 (21) E4149-E4157 (2017)
Year 2016
type	theme				author, title, journal, volume, page, year	PDF
paper		B			Yohei Saito, Yuki Sughiyama, Kunihiko　Kaneko, Tetsuya J Kobayashi,
title		1			"Discreteness-induced transitions in multibody reaction systems"	https://arxiv.org/abs/1605.06273
					Phys. Rev. E 94(2016), 022140, DOI:10.1103/PhysRevE.94.022140
paper				D	K.Shinoda　K. Kaneko
title				1	"Chaotic Griffiths Phase with Anomalous Lyapunov Spectra in Coupled Map Networks"	https://arxiv.org/abs/1605.02191
					Phys. Rev. Lett. 117 (2016), 254101
paper	A	B			T Kohsokabe, K Kaneko
title	1	2			"Boundary-Induced Pattern Formation from Temporal Oscillation: Spatial Map Analysis"	http://arxiv.org/abs/1603.01038
					EPL,Europhys.Lett.116　(2016) 48005 (editors's choice)
paper	A				Yamagishi J., Saito N,, and Kaneko K.,
title	1				"Symbiotic Cell Differentiation and Cooperative Growth in Multicellular Aggregates"	http://arxiv.org/abs/1512.08085
					PLoS Comp Biol 12(2016) e1005042
paper	A				Takeuchi N., Kaneko K., and Hogeweg P.,
title	2				"Evolutionarily stable disequilibrium: Endless dynamics of evolution in a stationary population"	http://rspb.royal
					Proc. Roy. Soc. B 283 (2016), 20153109
paper		B			Nen Saito, Yuki Sughiyama, Kunihiko Kaneko
title		1			"Motif Analysis for Small-Number Effects in Chemical Reaction Dynamics"	http://arxiv.org/abs/1512.02937
					J Chem. Phys., 145(2016)094111
paper	A				M.Hashimoto,　T.Nozoe, H.Nakaoka, R.Okura, S.Akiyoshi, K. Kaneko, E.Kussel, Y. Wakamoto
title	2				"Noise-driven growth rate gain in clonal cellular populations"	http://www.pnas.org/content/113/12/3251.abstract
					Proceedings of the National Academy of Sciences, 113, 3251–3256 (2016/3/22)
paper	A				Yusuke Himeoka, Kunihiko Kaneko
title	2				"Enzyme oscillation can enhance the thermodynamic efficiency of cellular metabolism: Consequence of anti-phase coupling between reaction flux and affinity"	http://iopscienc
					Physical Biology, 13, 026002, 2016(featured article)
paper	A				Yoshiya J Matsubara and Kunihiko Kaneko
title	2				"Optimal size for emergence of self-replicating polymer system"	http://arxiv.org/abs/1509.08865
					Phys. Rev. E 93 (2016) 032503
paper	A				B. Pfeuty and K. Kaneko
title	1				"Requirements for efficient cell-type proportioning: regulatory timescales, stochasticity and lateral inhibition"	http://iopscienc
					Physical Biology 13 (2016) 026007
paper	A				A.Kamimura and K. Kaneko
title	2				"Inverse Relationship Between Molecular Diversity And Resource Abundances"	http://arxiv.org/abs/1507.08742
					Physical Rev. E 93 (2016) 062419
paper			C		T. Kurikawa and K. Kaneko
title			1		"Dynamic Organization of Hierarchical Memories"	http://journals.p
					PLoS ONE 11(9): e0162640
review	A				K. Kaneko
title	1				"A Scenario for the Origin of Multicellular Organisms: Perspective from Multi-level Consistency Dynamics"	https://mitpress.mit.edu/books/multicellularity
	2
	4				in Multicullarity: Origins and Evolution, MIT Press, ed. K. Niklas and S. Newman (Feb. 2016)
paper	A				T. Kohsokabe and K. Kaneko
title	1				"Evolution-Development Congruence in Pattern Formation Dynamics: Bifurcations in Gene Expressions and Regulation of Networks Structures"	http://onlinelibr
	4				J. Exp Zoology B 326 (2016) 61-84
Year 2015
type	theme				author, title, journal, volume, page, year	PDF
paper	A				T.Miyamoto, C. Furusawa, and K. Kaneko
title	1				"Pluripotency, differentiation, and reprogramming: A gene expression dynamics model with epigenetic feedback regulation"	http://journals.p
					PLoS Comp. Biol. 11 (2015) e1004476
paper	A				T. S. Hatakeyama and K. Kaneko
title	3				"Reciprocity Between Robustness of Period and Plasticity of Phase in Biological Clocks"	http://journals.a
					Phys. Rev. Lett. 115, 218101 (2015)（Highlighted article, featured in Physics)
paper	A				C. Furusawa and K. Kaneko
title	4				"Global Relationships in Fluctuation and Response in Adaptive Evolution"	http://rsif.royals
					J.of the Royal Society Interface, 12 (2015) 20150482
paper	A				A. Kamimura and K. Kaneko
title	2				"Transition to diversification by competition for resources in catalytic reaction networks"	http://arxiv.org/abs/1408.2298
					Journal of Systems Chemistry 2015, 6:5	http://www.jsys
paper	A				Kunihiko Kaneko, Chikara Furusawa, and Tetsuya Yomo
title	2				"Universal relationship in gene-expression changes for cells in steady-growth state"	http://journals.a
	3
	4				Physical Review X5 (2015) 011014
paper		B			N. Saito and K. Kaneko
title		1			"Theoretical Analysis of Discreteness-Induced Transition in Autocatalytic Reaction Dynamics"	http://journals.a
					Phys. Rev. E 91 (2015) 022707
paper			C		D. Colliaux, P. Yger, K. Kaneko
title			1		"Impact of sub and supra-threshold adaptation currents in networks of spiking neurons"	http://link.spring
					Journal of Computational Neuroscience, 39, 255-270, 2015
paper	A				N. Takeuchi, O. X Cordero, E. V Koonin and K. Kaneko
title	4				"Gene-specific selective sweeps in bacteria and archaea caused by negative frequency-dependent selection"	http://www.biomedcentral.com/1741-7007/13/20
					BMC Biology 2015, 13:20
review			C	D	K. Kaneko
title			2	1	"Dynamical Systems++ for a Theory of Biological System"
					(Chaos, Information Processing, and Paradoxical Games ( honouring the memory of John Nicolis), World Scientific (ed. G. Nicolis and V. Basios) , 345-354, 2015
review				D	K. Kaneko
title				1	"From Globally Coupled Maps to Complex-Systems Biology"	http://dx.doi.org/10.1063/1.4916925
					Chaos 25, 097608 (2015)
Year 2014
type	theme				author, title, journal, volume, page, year	PDF
paper	A				A. Kamimura and K. Kaneko
title	2				"Compartmentalization and Cell Division through Molecular Discreteness and Crowding in a Catalytic Reaction Network"
					Life 2014, 4, 586-597; doi:10.3390/life4040586
paper	A				Y. Himeoka and K. Kaneko
title	2				"Entropy production of a steady-growth cell with catalytic reactions"	http://arxiv.org/abs/1403.3776
					Phys. Rev. E, 90 (2014) 042714
paper			C		T.Kurikawa and K. Kaneko
title			1		"Memories as bifurcations: Realization by collective dynamics of spiking neurons under stochastic inputs"
					Neural Networks (2014 Special Issue)
paper	A				T.S. Hatakeyama and K. Kaneko
title	3				"Homeostasis of the period of post-translational biochemical oscillators"	http://dx.doi.org/10.1016/j.febslet.2014.05.015
	5				FEBS Lett. 588 2282-2287　(2014)
paper	A			D	B. Pfeuty and K. Kaneko
title	1			5	"Reliable binary decisions based on oscillations"	http://journals.a
					Physical Review E,89　(2014)022707
paper	A				Tetsuhiro S. Hatakeyama , Kunihiko Kaneko
title	3				"Kinetic memory based on enzyme-limited competition"	http://www.plos
					PLoS Comput Biol 10: e1003784 (2014)	DOI: 10.1371/journal.pcbi.1003784
paper	A				Nobuto Takeuchi, Kunihiko Kaneko, and Eugene V. Koonin
title	4				"Horizontal Gene Transfer Can Stop Muller's Ratchet in Prokaryotes"	http://www.g3journal.org/content/4/2/325.full.pdf+html
					G3: Genes, Genomes, Genetics (2014) Feb 19;4(2):325-39.
paper	A				Nen Saito, Shuji Ishihara, and Kunihiko Kaneko
title	4				"Evolution of Genetic Redundancy : The Relevance of Complexity in Genotype-Phenotype Mapping"	http://iopscience.iop.org/1367-2630/16/6/063013
					New J. Physics, （2014） 16, 063013
review				D	Kunihiko Kaneko and Tatsuo Yanagita
title				3	"Coupled maps"	http://www.scholarpedia.org/article/Coupled_maps
					Scholarpedia, 9(5):4085, 2014
Year 2013
type	theme				author, title, journal, volume, page, year	PDF
paper				D	Hidetoshi Aoki and Kunihiko Kaneko
title				1	"Slow Stochastic Switching by Collective Chaos of Fast Elements"	http://journals.a
					Phys.Rev.Lett., 111, 144102 (2013)
paper	A			D	Y. Goto and K. Kaneko
title	1			5	"Minimal Model for Stem-Cell Differentiation"	http://pre.aps.org/abstract/PRE/v88/i3/e032718
					Phys.Rev.E.88(2013) 032718
paper			C		T. Kurikawa and K. Kaneko
title			1		"Embedding Responses in Spontaneous Neural Activity Shaped through Sequential Learning"	http://www.plos
					PLoS Computational Biology, 2013, 9, e1002943 (Accepted: January 10, 2013; Published: March 7, 2013)
paper	A			D	Yohei Kondo, Kunihiko Kaneko, and Shuji Ishihara
title	5			5	"Identifying dynamical systems with bifurcations from noisy partial observation"	http://pre.aps.org/abstract/PRE/v87/i4/e042716
					Phys. Rev. E., Phys. Rev. E 87, 042716 (19 Apr.2013)
paper	A				Nen Saito, Shuji Ishihara, and Kunihiko Kaneko
title	4				"The Baldwin effect under multi-peaked fitness landscapes: Phenotypic fluctuation accelerates evolutionary rate"	http://pre.aps.org/abstract/PRE/v87/i5/e052701
					Phys. Rev. E 87, 052701 (2013)
paper	A				Chikara Furusawa and Kunihiko Kaneko
title	3				"Epigenetic feedback regulation accelerates adaptation and evolution"	http://www.plos
					PLoS　One　2013,　8,　e61251
paper	A				Masayo Inoue, Kunihiko Kaneko
title	3				"Cooperative Adaptive Response in Gene Regulatory Networks with Many Degrees of Freedom"	http://www.plos
					PLoS Computational Biology, April 2013, Vol.9, Issue 4, e1003001
paper	A				D.Taniguchi, S.Ishihara, T.Ohnuki, M.Kitahara, K.Kaneko, S.Sawai
title	5				"Phase geometries of two-dimensional excitable waves govern self-organized morphodynamics of amoeboid cells"	http://www.pnas.org/content/110/13/5016.full
					Proc.Nat.Acad.Sci.USA, (2013) 110 , 5016-5021
proceeding			C		Tomoki Kurikawa and Kunihiko Kaneko
title			1		""Memories as Bifurcations”: A Simple Model"
					Advances in Cognitive Neurodynamics, (2013) 537-542
proceeding			C		Daisuke Shimaoka, Keiichi Kitajo, Kunihiko Kaneko, Yoko Yamaguchi
title			1		"Ongoing Global Phase Pattern and Visual Signal Detection"
					Advances in Cognitive Neurodynamics, (2013) 509-514
proceeding	A				Kunihiko Kaneko
title	4				"Balancing Robustness with Plasticity Through Evolution and Learning"
					Advances in Cognitive Neurodynamics, (2013) 379-385
review	A				S.Haruta, T.Yoshida, Y.Aoi, K.Kaneko, F.Futamata
title	4				"Challenges for Complex Microbial Ecosystems: Combination of Experimental Approaches with Mathematical Modeling"	https://www.jst
					Microbes and Environments, 28 (2013) 285-294, ME13034
Year 2012
type	theme				author, title, journal, volume, page, year	PDF
paper	A				C. Furusawa and K. Kaneko
title	1				"A Dynamical-Systems View of Stem Cell Biology"	http://www.scie
					Science 338 (2012) 215-217	http://www.scie
paper	A				Kunihiko Kaneko
title	4				"Evolution of Robustness and Plasticity under Environmental Fluctuation: Formulation in terms of Phenotypic Variances"	http://www.springerlink.com/content/150819h6t1716580/
					J. Stat. Phys. (Published online Aug.21, 2012) September 2012, Volume 148, Issue 4, pp 686-704
paper	A	B			Tetsuhiro S. Hatakeyama, Kunihiko Kaneko
title	3	3			"Generic temperature compensation of biological clocks by autonomous regulation of catalyst concentration"	http://www.pnas.org/content/109/21/8109.abstract
	5				PNAS, 109 (21) 8109-8114, 2012 (Published online before print May 7, 2012) , featured by Todai Research:	http://www.u-t
paper	A				Chikara Furusawa and Kunihiko Kaneko
title	2				"Adaptation to optimal cell growth through self-organized criticality"	http://chaos.c.u
	3				Phys. Rev. Lett., 108(2012)208103, featured by Complexity Digest
paper			C		Tomoki Kurikawa and Kunihiko Kaneko
title			1		"Associative Memory Model with the Spontaneous neural Activity"	http://iopscience.iop.org/0295-5075/98/4/48002/article
					Europhys. Lett. 98 (2012) 48002
paper	A				Ayaka Sakata, Koji Hukushima and Kunihiko Kaneko
title	4				"Replica symmetry breaking in an adiabatic spin-glass model of adaptive evolution"	http://iopscience.iop.org/0295-5075/99/6/68004/article
					Europhys. Lett. vol. 99 68004 (2012)
paper			C		Tomoki Kurikawa, Kunihiko Kaneko
title			1		"Learning to Memorize Input-Output Mapping as Bifurcation in Neural Dynamics; Relevance of Multiple Timescales for Synapse Changes"	http://chaos.c.u
					Neural Computing and Applications, 21 (2012), 725-734 (published online 21 May 2011)
proceeding	A				K. Kaneko
title	2				"From catalytic reaction networks to protocells"
					to appear in Engineering of Chemical Complexity" (ed. A. Mikhailov) ,World Scientific (2012)
review	A				Kunihiko Kaneko
title	4				"Phenotypic Plasticity and Robustness: Evolutionary Stability Theory, Gene Expression Dynamics Model, and Laboratory Experiments"
					Evolutionary Systems Biology (2012) (Springer, ed. O. Soyer)
Year 2011
type	theme				author, title, journal, volume, page, year	PDF
paper	A				Narito Suzuki, Chikara Furusawa, and Kunihiko Kaneko
title	1				"Oscillatory Protein Expression Dynamics Endows Stem Cells with Robust Differentiation Potential"	http://www.plos
					PLoS One 6: e27232　（2011）
paper	A				Yohei　Kondo and Kunihiko Kaneko
title	2				"Growth states of catalytic reaction networks exhibiting energy metabolism"	http://arxiv.org/abs/1104.0365
					Physical Rev. E 84, 011927 (2011)	http://chaos.c.u
paper	A				Masayo Inoue and Kunihiko Kaneko	http://prl.aps.org/abstract/PRL/v107/i4/e048301
title	3				"Weber’s Law for Biological Responses in Autocatalytic Networks of Chemical Reactions"	http://arxiv.org/abs/1104.1380
					Phys. Rev. Lett. 107, 048301 (2011) [4 pages]	http://chaos.c.u
paper	A				K. Kaneko
title	1				"Characterization of stem cells and cancer cells on the basis of gene expression profile stability, plasticity and robustness"	http://onlinelibr
					Bioessays 2011 Vol. 33: 403–413 (highlighted article)(2 May)	http://chaos.c.u
paper			C		T. Kurikawa and K. Kaneko
title			1		"Learning Shapes Spontaneous Activity Itinerating over Memorized States"	http://www.plos
					PLoS One, (2011) Vol.6, e17432
paper	A				K. Kaneko
title	4				"Proportionality between Variances in Gene Expression Induced by Noise and Mutation: Consequence of Evolutionary Robustness"	http://www.biomedcentral.com/1471-2148/11/27
					BMC Evolutionary Biology 2011, 11:27 (Jan.26)
paper	A				T. Sugawara and K. Kaneko
title	5				"Chemophoresis as a driving force for intracellular organization: Theory and application to plasmid partitioning"	https://www.jst
					Biophysics, 7 (2011) 77-88
paper			C		D. Shimaoka and K. Kaneko
title			1		"Dynamical systems modeling of continuous flash suppression"	http://chaos.c.u
					Vision Research, Volume 51, Issue 6, 25 March 2011, Pages 521-528
proceeding	A				Kunihiko Kaneko
title	1				"Complex-Systems Biology Approach to Reproduction and Evolution, in Principles of Evolution : From the Planck Epoch to Complex Multicellular Life"
	4				Springer, (2011) ed. Meyer-Ortmanns and Tunner
review	A				B. Lehner and K. Kaneko
title	4				"Fluctuation and response in biology"	http://www.spri
					Cellular and Molecular Life Sciences, March 2011, Vol.68, 1005-1010
interview	A				Kunihiko Kaneko
title					"The challenges facing systemic approaches in biology: an interview with Kunihiko Kaneko"	http://www.fron
					Frontiers in Systems Physiology, 2011(Dec.5), Vol. 2, 93(pp1-4)
Year 2010
type	theme				author, title, journal, volume, page, year	PDF
paper	A	B			A. Kamimura and K. Kaneko
title	2	1			"Reproduction of a Protocell by Replication of Minority Molecule in Catalytic Reaction Network"	http://prl.aps.org/pdf/PRL/v105/i26/e268103
					Phys.Rev.Lett., 105 (2010) 268103
					featured in Science and New Scientist	http://news.sci
						http://www.new
paper		B			A. Awazu and K. Kaneko
title		1			"Discreteness-Induced Slow Relaxation in Reversible Catalytic Reaction Networks"	http://chaos.c.u
		3			Phys Rev. E 81(2010), 051920
paper	A				A. Nakajima, T.Isshiki, K. Kaneko and S. Ishihara
title	1				"Robustness under functional constraint: The genetic network for temporal expression in Drosophila neurogenesis"	http://www.plos
					PLoS Computational Biology, 6(2010)e1000760
paper	A	B			M. Inoue and K. Kaneko
title	3	5			"Dynamics.of Coupled Adatpive Elements: Bursting and Intermitteny Oscillations Generated by Frustration in the Network"	http://chaos.c.u
					Phys. Rev. E 81, 026203 (2010)
comment	A				H. Takagi and K. Kaneko
title	4				"Topological, statistical, and dynamical origins of genetic code Comment on 'A colorful origin for the genetic code: Information theory, statistical mechanics and the emergence of molecular codes' by T. Tlusty"	http://chaos.c.u
					Physics of Life 7 (2010)379-380
proceeding			C		Tomoki Kurikawa, Kunihiko Kaneko
title			1		"Learning Shapes Bifurcations of Neural Dynamics upon External Stimuli"	http://chaos.c.u
					Lecture Notes in Computer Science 6443, page 153-160, 2010 (the best student paper award)
proceeding			C		Daisuke Shimaoka, Keiichi Kitajo, Kunihiko Kaneko, Yoko Yamaguchi
title			1		"Transient process of cortical activity during Necker cube perception: from local clusters to global synchrony"	http://chaos.c.u
					Nonlinear Biomedical Physics 2010, 4(Suppl 1):S7