| Year 2009 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
A |
|
|
|
B. Pfeuty and K. Kaneko |
|
|
| title |
3 |
|
|
|
"The combination of positive and negative feedback
loops confers exquisite flexibility to biochemical switches" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/benjamin2009.pdf |
|
| |
|
|
|
|
Physical Biology, 6 (2009) 046013 |
|
|
| paper |
A |
|
|
|
A. Sakata, K Hukushima, and K.
Kaneko |
|
|
| title |
4 |
|
|
|
"A statistical-mechanical study of evolution of
robustness in noisy environment" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/sakata2009pre.pdf |
|
| |
|
|
|
|
Phys. Rev. E.80, (2009) 051919 |
|
|
| paper |
A |
B |
|
|
A. Awazu and K. Kaneko |
|
|
| title |
2 |
3 |
|
|
"Ubiquitous “glassy” relaxation in catalytic reaction
networks" |
http://chaos.c.u-tokyo.ac.jp/papers/bio0/awazu-kk2009PREglass.pdf |
|
| |
|
|
|
|
Phys Rev. E, 80, 041931 (2009) |
|
|
| paper |
A |
B |
|
|
A. Awazu and K. Kaneko |
|
|
| title |
2 |
1 |
|
|
"Self-organized criticality of a catalytic reaction
network under flow" |
http://chaos.c.u-tokyo.ac.jp/papers/bio0/AK-SOC.pdf |
|
| |
|
|
|
|
Phys. Rev. E.80, 010902(R) 2009 (Rapid Communication) |
|
|
| paper |
A |
|
|
|
S.Tsuru, J.Ichinose, T. Sakurai,
A.Kashiwagi, B-W. Ying, K. Kaneko, and T. Yomo |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/tsuru.pdf |
|
| title |
2 |
|
|
|
"Noisy cell growth rate leads to fluctuating protein
concentration in bacteria" |
Supplement |
|
| |
|
|
|
|
Physical Biology 6 (2009) 036015 |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/tsuru_suppl.pdf |
|
| paper |
A |
|
|
|
K. Kaneko |
|
|
| title |
4 |
|
|
|
"Relationship among
Phenotypic Plasticity, Genetic and Epigenetic Fluctuations, Robustness, and
Evolovability; Waddington's Legacy revisited under the Spirit of
Einstein" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/kkjbs2009.pdf |
|
| |
|
|
|
|
J. Biological Science, 34 (2009) 529-542 |
|
|
| paper |
A |
|
|
|
C. Furusawa and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Chaotic Expression
Dynamics Implies Pluripotency: When Theory and Experimentation Meet" |
http://www.biology-direct.com/content/4/1/17 |
|
| |
|
|
|
|
Biology Direct 4 (2009) 17 |
|
|
| paper |
A |
|
|
|
H. Yoshida and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Unified description of
regeneration by coupled dynamical systems theory: Intercalary/segmented
regeneration in insect legs" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/yoshida2009DD.pdf |
|
| |
|
|
|
|
Developmental Dynamics 238 (2009) 1974-1983 |
|
|
| paper |
A |
|
|
|
A. Sakata, K Hukushima, and K.
Kaneko |
|
|
| title |
4 |
|
|
|
"Funnel landscape and
mutational robustness as a result of evolution under thermal noise" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/shk-prl.pdf |
|
| |
|
|
|
|
Phys. Rev. Lett., 102 (2009) 148101 |
|
|
| paper |
A |
|
|
|
Y.Ito, H.Toyota, K. Kaneko, and T.
Yomo |
http://www.nature.com/msb/journal/v5/n1/full/msb200923.html |
|
| title |
4 |
|
|
|
"How Selection affects
Phenotypic Fluctuation" |
Supporting Information |
|
| |
|
|
|
|
Molecular Systems Biology, 5 (2009) 264 |
http://www.nature.com/msb/journal/v5/n1/suppinfo/msb200923_S1.html |
|
| review |
|
|
|
D |
J. Ito and K. Kaneko |
|
|
| title |
|
|
|
1 |
""Self-Organization
of Network Structure in Coupled-map Systems" in "Adaptive
Networks"" |
http://chaos.c.u-tokyo.ac.jp/papers/biodyn/JI-KK_AdaptiveNetworks.pdf |
|
| |
|
|
|
|
ed. H. Sayama and T.Gross. (2009) |
|
|
| proceeding |
A |
|
|
|
Ayaka Sakata, Koji Hukushima, and
Kunihiko Kaneko |
|
|
| title |
4 |
|
|
|
"A
statistical-mechanical study of evolution of robustness: An approach from
two-temperature models" |
|
|
| |
|
|
|
|
Journal of Physics: Conference Series 197 (2009) 012003 |
|
|
| Year 2008 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
A |
|
|
|
B. Pfeuty, T. David-Pfeuty, and K.
Kaneko |
|
|
| title |
5 |
|
|
|
"Underlying Principles
of cell fate determination during G1 phase of the mammalian cell cycle" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/Pfeuty2008.pdf |
|
| |
|
|
|
|
Cell Cycle 7 (2008) 1-13 |
|
|
| paper |
A |
|
|
|
K. Kaneko |
|
|
| title |
4 |
|
|
|
"Shaping Robust System
Through Evolution" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/chaos2008.pdf |
|
| |
|
|
|
|
Chaos, 18 (2008) 026112 |
|
|
| paper |
A |
|
|
|
K. Kaneko and C. Furusawa |
|
|
| title |
2 |
|
|
|
"Consistency Principle
in Biological Dynamical Systems" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/eccs.pdf |
|
| |
4 |
|
|
|
Theory in Biosciences, 127 (2008) 195-204 |
|
|
| paper |
A |
|
|
|
A. Nakajima and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Regulative
Differentiation as Bifurcation of Interacting Cell Population" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/diff.pdf |
|
| |
|
|
|
|
J. Theor Biol. 253 (2008) 779-787 |
|
|
| paper |
A |
|
|
|
M. Inoue and K. Kaneko |
|
|
| title |
3 |
|
|
|
"Conditions for
self-consistent aggregation by chemotactic particles" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/inoue_chemoagg08.pdf |
|
| |
|
|
|
|
Phys. Rev. E 77, 041916 (2008) |
|
|
| paper |
A |
|
|
|
K. Kaneko, K. Sato, T. Michiue, K.
Okabayashi, K. Ohnuma, H. Danno, and M. Asashima |
|
|
| title |
1 |
|
|
|
"Developmental
Potential Describing Morphogenesis in vivo and in vitro" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/asashima-JEZ-final.pdf |
|
| |
|
|
|
|
J. Experimental Zoology B 310 (2008) 492-503 |
|
|
| paper |
A |
|
|
|
K. Fujimoto, S. Ishihara, and K.
Kaneko |
|
|
| title |
1 |
|
|
|
"Network Evolution of
Body Plans" |
http://www.plosone.org/article/fetchArticle.action?articleURI=info:doi/10.1371/journal.pone.0002772 |
|
| |
4 |
|
|
|
PLoS ONE, 3 (2008) e2772 |
|
|
| paper |
A |
|
|
|
C. Furusawa and K. Kaneko |
http://compbiol.plosjournals.org/perlserv/?request=get-document&doi=10.1371/journal.pcbi.0040003 |
|
| title |
3 |
|
|
|
"A generic mechanism
for adaptive gowth rate regulation" |
selected in Faculty of 1000
Biology |
|
| |
|
|
|
|
PLoS Computationa Biology, 4(2008) e3 |
http://www.f1000biology.com/article/id/1104005 |
|
| paper |
A |
|
|
|
T. Toyota, K. Takakura, Y.
Kageyama, K. Kurihara, N. Maru, K. Ohnuma, K. Kaneko, and T. Sugawara |
|
|
| title |
2 |
|
|
|
"Population study of
sizes and components of self-reproducing giant multilamellar vesicles." |
|
|
| |
|
|
|
|
Langmuir,24 (2008) 3037-3044 |
|
|
| review |
A |
|
|
|
K. Kaneko and C. Furusawa |
|
|
| title |
5 |
|
|
|
"Relevance of
Phenotypic Noise to Adaptation and Evolution" |
http://scitation.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=ISBEAT000002000005000234000001&idtype=cvips&gifs=Yes |
|
| |
|
|
|
|
IET Systems Biology, 2 (2008) 234-246 |
|
|
| review |
A |
|
|
|
K. Kaneko |
|
|
| title |
2 |
|
|
|
" "Constructive
Approach to Protocell: Theory and Experiments" in
"Protocell"" |
http://chaos.c.u-tokyo.ac.jp/papers/others/protocell.pdf |
|
| |
|
|
|
|
ed. M. Bedau et al. (2008) |
|
|
| Year 2007 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
A |
|
|
|
B. Pfeuty and K. Kaneko |
|
|
| title |
2 |
|
|
|
"Minimal requirements
for a robust cell size control in eukaryotic cells" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/benjamin2007.pdf |
|
| |
|
|
|
|
Physical Biology, 4 (2007) 194-204 |
|
|
| paper |
|
B |
|
|
A. Awazu and K. Kaneko |
|
|
| title |
|
1 |
|
|
"Discretenss-induced
Transition in Catalytic Reaction Networks" |
http://chaos.c.u-tokyo.ac.jp/papers/biodyn/awazu2007.pdf |
|
| |
|
|
|
|
Phys Rev. E76, 041915 (2007) |
|
|
| paper |
A |
|
|
|
K. Kaneko |
|
|
| title |
4 |
|
|
|
"Evolution of
Robustness to Noise and Mutation in Gene Expression Dynamics" |
http://www.plosone.org/article/fetchArticle.action?articleURI=info:doi/10.1371/journal.pone.0000434 |
|
| |
|
|
|
|
PLoS One(2007) 2 e434 |
|
|
| paper |
A |
|
|
|
K. Sato and K. Kaneko |
|
|
| title |
4 |
|
|
|
"Evolution Equation of
Phenotype Distribution: General Formulation and Application to Error
Catastrophe" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/sato-pre.pdf |
|
| |
|
|
|
|
Phys. Rev. E75 (2007) 061909 |
|
|
| paper |
|
B |
|
|
Y. Watanabe and K. Kaneko |
|
|
| title |
|
5 |
|
|
"State Generation by
Transient Truncation in Coupled Threshold Dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/others/watanabe.pdf |
|
| |
|
|
|
|
Phys. Rev. E., 75 (2007) 016206 |
|
|
| paper |
|
B |
|
|
Y. Togashi and K. Kaneko |
|
|
| title |
|
1 |
|
|
"Switching Dynamics in
reaction Networks Induced by Molecular Discreteness" |
|
|
| |
|
|
|
|
J. Phys. Condens. Matt. 19,(2007) 065150 (10p) |
|
|
| proceeding |
A |
|
|
|
Kunihiko Kaneko |
|
|
| title |
2 |
|
|
|
"From a set of chemical
reactions to reproducing cells" |
|
|
| |
|
|
|
|
Origin of Life and Evolution of the Biosphere, 37 (2007)
449-453 |
|
|
| proceeding |
A |
|
|
|
Kunihiko Kaneko |
|
|
| title |
2 |
|
|
|
"Minority control and
Genetic Takeover" |
|
|
| |
|
|
|
|
Origin of Life and Evolution of the Biosphere, 37(2007)
465-468 |
|
|
| proceeding |
A |
|
|
|
Chikara Furusawa and Kunihiko
Kaneko |
|
|
| title |
2 |
|
|
|
"Universal Statistics
for Chemical Abundances in Reprducing Cell" |
|
|
| |
|
|
|
|
Journal of Korean Physical Scoiety, 2007, vol.50 142-149 |
|
|
| Year 2006 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
A |
|
|
|
A. Kashiwagi, I. Urabe, K. Kaneko
and T. Yomo |
|
|
| title |
3 |
|
|
|
"Adaptive response of a
gene network to environmental changes by attractor selection" |
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0000049 |
|
| |
|
|
|
|
PLOS ONE 1 (2006) e49
(selected for Faculty of 1000 Biology ) |
|
|
| paper |
A |
|
|
|
D. Lawson, H.J. Jensen and K.
Kaneko |
|
|
| title |
4 |
|
|
|
"Diversity as a product
of interspecial interactions" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/diversity.pdf |
|
| |
|
|
|
|
J theor. Biol. 243(2006) 299-307 |
|
|
| paper |
A |
|
|
|
M. Inoue and K. Kaneko |
|
|
| title |
3 |
|
|
|
"Condition for
Intra-cellular Adaptive Dynamics for Chemotaxis" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/ChemotaxisCondition0217.pdf |
|
| |
|
|
|
|
Phys. Rev. E., 74 (2006) 011903 |
|
|
| paper |
A |
|
|
|
K. Sato and K. Kaneko |
|
|
| title |
2 |
|
|
|
"On the Distribution of
State Values of Reproducing Cells" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/growthFP.pdf |
|
| |
|
|
|
|
Physical Biology 3 (2006) 74-82 |
|
|
| paper |
|
B |
|
D |
H. Morita and K. Kaneko |
|
|
| title |
|
3 |
|
2 |
"Collective oscillation
in a Hamiltonian dynamical system" |
http://chaos.c.u-tokyo.ac.jp/papers/hamil/morita-collective.pdf |
|
| |
|
|
|
|
Phys. Rev. Lett.96 (2006) 050602 |
|
|
| paper |
A |
B |
|
|
S. Ishihara and K. Kaneko |
|
|
| title |
1 |
2 |
|
|
"Turing pattern with
proportion preservation" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/Turing.pdf |
|
| |
|
|
|
|
J. Theo. Biol. 238 (2006) 683-693 |
|
|
| paper |
A |
|
|
|
K. Kaneko and C. Furusawa |
|
|
| title |
4 |
|
|
|
"An Evolutionary
Relationship between Genetic Variation and Phenotypic Fluctuation" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/jtbevol2006.pdf |
|
| |
|
|
|
|
J. Theo. Biol. 240 (2006) 78-86 |
|
|
| paper |
A |
|
|
|
C.Furusawa and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Morphogenesis,
Plasticity, and Irreversibility" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/furusawa-morpho2006.pdf |
|
| |
|
|
|
|
International Journal Developmental Biology, 50 (2006)
223-232 |
|
|
| paper |
A |
|
|
|
C.Furusawa and K. Kaneko |
|
|
| title |
2 |
|
|
|
"Evolutionary origin of
power-laws in Biochemical Reaction Network; embedding abundance distribution
into topology" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/network.pdf |
|
| |
4 |
|
|
|
Phys. Rev. E 73, (2006) 011912 |
|
|
| paper |
|
|
C |
|
A. Ponzi, A. Yasutomi and K.
Kaneko |
|
|
| title |
|
|
4 |
|
"Complex Dynamical
Behavior in Economic Production Networks" |
http://chaos.c.u-tokyo.ac.jp/papers/others/jebjune04.pdf |
|
| |
|
|
|
|
Journal of Economic Behavior and Organization, 61 (2006)
729-749 |
|
|
| paper |
A |
|
|
|
Kiyoshi Ohnuma, Tetsuya Yomo,
Makoto Asashima and Kunihiko Kaneko |
|
|
| title |
5 |
|
|
|
"Sorting of cells of
the same size, shape, and cell cycle stage for a single cell level assay
without staining" |
http://www.biomedcentral.com/1471-2121/7/25/ |
|
| |
|
|
|
|
BMC Cell Biology 2006, 7:25 |
|
|
| review |
A |
|
|
|
K. Kaneko |
|
|
| title |
1 |
|
|
|
" "Consistency
Principle in a Biological System" Crossraods" |
|
|
| |
2 |
|
|
|
Journal of Asia Pacific Center for Theoretical Physics
Vol.13. Oct. 2006 |
|
|
| proceeding |
|
|
|
D |
Hidetoshi Morita and Kunihiko
Kaneko |
|
|
| title |
|
|
|
1 |
"Self-organization of
collective oscillation in many body systems" |
|
|
| |
|
|
|
2 |
Institute of Physics
Publishing Journal of Physics: Conference Series 31 (2006) 63?67 / The Third
21COE Symposium: Astrophysics as Interdisciplinary Science |
|
|
| proceeding |
|
B |
|
|
Akinori Awazu and Kunihiko Kaneko |
|
|
| title |
|
2 |
|
|
"Pulse Replications and
spatially differentiated structure formation in one-dimensional lattice
dynamical system" |
|
|
| |
|
|
|
|
Mathematical Biosciences 201 (2006) 90-100 |
|
|
| proceeding |
|
|
|
D |
Takeshi Sugawara and Kunihiko
Kaneko |
|
|
| title |
|
|
|
3 |
"Pattern Dynamics in a
Two-dimensional Gas Discharge System" |
|
|
| |
|
|
|
|
Prog. Theor. Phys. Suppl. 161 (2006) 344-347 |
|
|
| proceeding |
|
|
|
D |
Hidetoshi Morita and Kunihiko
Kaneko |
|
|
| title |
|
|
|
1 |
"Collective Motion as a
Transient Structure in a Hamiltonain Dynamical System" |
|
|
| |
|
|
|
2 |
Prog. Theor. Phys. Suppl. 162 (2006) 104-111 |
|
|
| Book |
|
|
|
|
K. Kaneko |
|
|
| title |
|
|
|
|
Life: An Introduction to
Complex Systems Biology |
http://www.amazon.com/dp/3642069150/ |
|
| |
|
|
|
|
Springer 2006 |
|
|
| Year 2005 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
|
B |
|
|
K. Kaneko |
|
|
| title |
|
5 |
|
|
"Inter-Intra Molecular
Dynamics as an Iterated Function System" |
http://chaos.c.u-tokyo.ac.jp/papers/others/ifs.pdf |
|
| |
|
|
|
|
J. Phys. Soc. Japan 74 (2005), 2386-2390 |
|
|
| paper |
|
B |
C |
D |
S. Ishihara and K. Kaneko |
|
|
| title |
|
5 |
3 |
1 |
"Magic number 7 ± 2 in
networks of threshold dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/others/PhysRevLett_94_058102.pdf |
|
| |
|
|
|
|
Phys. Rev. Lett., 94(2005) 058102 |
|
|
| paper |
|
B |
|
D |
H. Morita and K. Kaneko |
|
|
| title |
|
3 |
|
2 |
"Roundabout relaxation:
collective excitation requires a detour to equilibrium" |
http://chaos.c.u-tokyo.ac.jp/papers/hamil/morita_1d.pdf |
|
| |
|
|
|
|
Phys. Rev. Lett., 94 (2005) 087203 |
|
|
| paper |
A |
|
|
|
C. Furusawa, T. Suzuki, A.
Kashiwagi, T. Yomo, and K. Kaneko |
|
|
| title |
2 |
|
|
|
"Ubiquity of Log-normal
Distributions in Intra-cellular Reaction Dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/furusawa05_02.pdf |
|
| |
|
|
|
|
BIOPHYSICS, 1(2005) 25 |
|
|
| paper |
A |
|
|
|
K. Kaneko |
|
|
| title |
2 |
|
|
|
"On Recursive
Production and Evolvabilty of Cells: Catalytic Reaction Network
Approach" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/adv.pdf |
|
| |
|
|
|
|
Adv. Chem. Phys. , 130 (2005) 543-598 |
|
|
| paper |
A |
|
|
|
H. Yoshida, C.Furusawa and K.
Kaneko |
|
|
| title |
1 |
|
|
|
"Selection of initial
condition for recursive production of multicellular organisms" |
http://chaos.c.u-tokyo.ac.jp/papers/others/yoshi-furu04.pdf |
|
| |
|
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|
|
J. theor. Biol.233, (2005) 501-514 |
|
|
| paper |
A |
|
|
|
H. Takagi and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Dynamical Systems
Basis of Metamorphosis: Diversity and Plasticity of Cellular States in
Reaction Diffusion Netowork" |
http://chaos.c.u-tokyo.ac.jp/papers/others/htakagi-jtb-revise2.pdf |
|
| |
|
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|
|
Journal of Theoretical Biology, 234, (2005) 173-186 |
|
|
| paper |
|
B |
|
|
Y. Togashi and K. Kaneko |
|
|
| title |
|
1 |
|
|
"Discreteness-induced
Stochastic Steady State in Reaction Diffusion Systems: Self-consistent
Analysis and Stochastic Simulations" |
http://chaos.c.u-tokyo.ac.jp/papers/others/togashi-kura.pdf |
|
| |
|
|
|
|
Physica D 205(2005) 87-99 |
|
|
| paper |
|
|
|
D |
F. Willeboordse and K. Kaneko |
|
|
| title |
|
|
|
1 |
"Externally controlled
attractor selection in a high-dimensional system" |
http://chaos.c.u-tokyo.ac.jp/papers/FrederickPRE2005.pdf |
|
| |
|
|
|
|
Phys. Rev. E. , 72 (2005) 026207 |
|
|
| paper |
|
|
|
D |
S. Honjo and K. Kaneko |
|
|
| title |
|
|
|
2 |
"Structure of
Resonances and Transport in Multidimensional Hamiltonian Dynamical
Systems" |
|
|
| |
|
|
|
|
Adv.Chem.Phys.,130 (2005) 437-463 |
|
|
| review |
A |
|
|
|
K. Kaneko and Chikara Furusawa |
|
|
| title |
2 |
|
|
|
" "Universal
Statistics of Cells with Recursive Production"" in "Networks
of interacting machines: productuion orgganization in complex industrial
systems and biological cells"" |
http://chaos.c.u-tokyo.ac.jp/papers/others/mikhailov.pdf |
|
| |
|
|
|
|
World Scientific. ed. A Mikhailov et al. (2005) |
|
|
| review |
|
|
|
D |
K. Kaneko |
|
|
| title |
|
|
|
3 |
"Coupled Map
Lattices" |
|
|
| |
|
|
|
|
Encyclopedia of Nonlinear Science. Ed. Alwyn Scott. New
York: Routledge, 2005. |
|
|
| proceeding |
A |
|
|
|
Tetsuya Yomo, Yoichiro Ito,
Katsuhiko Sato, Kunihiko Kaneko |
|
|
| title |
4 |
|
|
|
"Phenotypic fluctuation
rendered by a single genotype and evolutionary rate" |
|
|
| |
|
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|
|
Physica A 350 (2005) 1-5 |
|
|
| Year 2004 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
|
B |
|
|
K. Fujimoto and K. Kaneko |
|
|
| title |
|
5 |
|
|
"Convective Instability
with Time Scale Translation of the Transmitted Disturbance" |
http://chaos.c.u-tokyo.ac.jp/papers/others/fujimoto-physD2004.pdf |
|
| |
|
|
|
|
Physica D, 196, 67-89. 2004 |
|
|
| paper |
|
B |
|
|
Y. Togashi and K. Kaneko |
|
|
| title |
|
1 |
|
|
"Molecular discreteness
in reaction-diffusion systems yields steady states not seen in the continuum
limit" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/TogashiKaneko2004PRE.pdf |
|
| |
|
|
|
|
Phys. Rev. E, 70, 020901(R). 2004 |
|
|
| paper |
|
B |
|
|
A.Awazu and K. Kaneko |
|
|
| title |
|
2 |
|
|
"Relaxation to
equilibrium can be hindered by transient dissipative structures" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/awazu04.pdf |
|
| |
|
3 |
|
|
Phys. Rev. Lett. 92 (2004) 258302 |
|
|
| paper |
|
B |
|
|
N. Nakagawa and K. Kaneko |
|
|
| title |
|
4 |
|
|
"Autonomous Energy
Transducer: Proposition, Example, Basic Characteristics" |
http://chaos.c.u-tokyo.ac.jp/papers/hamil/autoene.pdf |
|
| |
|
|
|
|
Physica A 338 (2004) 511-536 |
|
|
| proceeding |
A |
|
|
|
K. Kaneko |
|
|
| title |
1 |
|
|
|
"Constructive and
Dynamical Systems Approach to Life" |
http://chaos.c.u-tokyo.ac.jp/papers/others/birkhauser04.pdf |
|
| |
2 |
|
|
|
Proceedings of Modelling
and Theory in Biological systems , Function and Regulation of Cellular
Systems:Experiments and Models,213-224, ed. by A.Deutsch, M.Falcke, J.Howard,
W.Zimmermann(Birkhaeuser Verlag Basel) |
|
|
| Year 2003 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
|
B |
|
D |
H. Morita and K. Kaneko |
|
|
| title |
|
3 |
|
2 |
"Self-Organized
Bottleneck in Energy Relaxation" |
http://chaos.c.u-tokyo.ac.jp/papers/hamil/morita.pdf |
|
| |
|
|
|
|
Europhys. Lett., 66(2003) 198-204 |
|
|
| paper |
A |
|
|
|
K. Sato, Y. Ito, T. Yomo, and K.
Kaneko |
|
|
| title |
4 |
|
|
|
"On the Relation
between Fluctuation and Response in Biological Systems" |
http://133.11.199.19:8080/-_-http//www.pnas.org/cgi/reprint/100/24/14086.pdf |
|
| |
|
|
|
|
Proc. Nat. Acad. Sci. USA 100 (2003) 14086-14090 |
|
|
| paper |
A |
|
|
|
K. Kaneko |
|
|
| title |
2 |
|
|
|
"Recursiveness,
Switching, and Fluctuations in a Replicating Catalytic Network" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/netprl4.pdf |
|
| |
|
|
|
|
Phys. Rev.E. 68 (2003) 031909 |
|
|
| paper |
|
B |
|
|
K. Fujimoto and K. Kaneko |
|
|
| title |
|
5 |
|
|
"Bifurcation cascade
realized by Chaotic Itinerancy" |
|
|
| |
|
|
|
|
Chaos 13 (2003) 1041-1056 |
|
|
| paper |
|
B |
|
|
N. Nakagawa and K. Kaneko, and T.
Komatsu |
|
|
| title |
|
4 |
|
|
"Energy Conversion by
Autonomous Regulation of Chaos: Dynamical Mechanism of Loose Coupling" |
http://chaos.c.u-tokyo.ac.jp/papers/chaos/chaos_energy.pdf |
|
| |
|
|
|
|
Chaos, 13 (2003) 1032-1040 |
|
|
| paper |
|
B |
|
|
K. Fujimoto and K. Kaneko |
|
|
| title |
|
5 |
|
|
"How Fast Elements can
Affect Slow Dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/others/Fujimoto-PhysD2003.pdf |
|
| |
|
|
|
|
Physica D 180 (2003) 1-16 |
|
|
| paper |
|
B |
|
|
Y. Togashi and K. Kaneko |
|
|
| title |
|
1 |
|
|
"Alteration of Chemical
Concentrations through Discreteness-Induced Transitions in Small
Autocatalytic Systems" |
http://chaos.c.u-tokyo.ac.jp/papers/others/togashi03.pdf |
|
| |
|
|
|
|
J.Phys.Soc. Japan 72 (2003)62-68 |
|
|
| paper |
A |
|
|
|
C. Furusawa and K. Kaneko |
|
|
| title |
2 |
|
|
|
"Zipf's law in Gene
Expression" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/PRL88102.pdf |
|
| |
|
|
|
|
Phys. Rev. Lett., 90 (2003) 088102 (selected in Faculty of
1000 Biology as hidden jewel ) |
|
|
| paper |
A |
|
|
|
C. Furusawa and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Robust Development as
a Consequence of Generated Positional Information" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/posi.pdf |
|
| |
|
|
|
|
J. Theor. Biol. 224 (2003) 413-435 |
|
|
| paper |
A |
|
|
|
K. Kaneko |
|
|
| title |
2 |
|
|
|
"Recursiveness and
Evolvability in Mutually Catalytic Reaction System" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/ws03.pdf |
|
| |
|
|
|
|
Adv. in Complex Systems, Vol.6 (2003)79-92 |
|
|
| paper |
|
|
|
D |
J. Ito and K. Kaneko |
|
|
| title |
|
|
|
1 |
"Spontaneous structure
formation in a network of dynamic elements" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/ito2003.pdf |
|
| |
|
|
|
|
Phys Rev E 67 (2003) 046226 |
|
|
| paper |
|
B |
|
|
N. Nakagawa and K. Kaneko |
|
|
| title |
|
4 |
|
|
"Dynamical mechanism
for the conversion of energy at a molecular scale" |
http://chaos.c.u-tokyo.ac.jp/papers/hamil/nah2003.pdf |
|
| |
|
|
|
|
Phys. Rev. E 67 (2003) 040901(R) |
|
|
| paper |
|
|
C |
|
A. Ponzi, A. Yasutomi, and K.
Kaneko |
|
|
| title |
|
|
4 |
|
"A Nonlinear model of
Economic Production Processes" |
http://chaos.c.u-tokyo.ac.jp/papers/others/ponzi2003.pdf |
|
| |
|
|
|
|
Physica A 324 (2003) 372-379 |
|
|
| paper |
|
|
C |
|
N. Kataoka and K. Kaneko |
|
|
| title |
|
|
2 |
|
"Dynamical Networks in
Function Dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/others/kataoka03.pdf |
|
| |
|
|
|
|
Physica D 181 (2003) 235-251 |
|
|
| paper |
|
|
|
D |
T. Shibata and K. Kaneko |
|
|
| title |
|
|
|
1 |
"Coupled Map Gas:
structure formation and dynamics of interacting mobile elements with internal
dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/gcm/shibata02.pdf |
|
| |
|
|
|
|
Physica D 181(2003) 197-214 |
|
|
| paper |
A |
|
|
|
T. Yamamoto and K. Kaneko |
|
|
| title |
5 |
|
|
|
"Tile Automaton in the
well-mixed medium" |
http://chaos.c.u-tokyo.ac.jp/papers/bio0/yamamoto03.pdf |
|
| |
|
|
|
|
Physica D 181 (2003) 252-273 |
|
|
| review |
|
|
|
D |
K. Kaneko and I. Tsuda |
|
|
| title |
|
|
|
1 |
"Chaotic
Itinerancy" |
http://chaos.c.u-tokyo.ac.jp/papers/chaos/chaos_chaotic.pdf |
|
| |
|
|
|
|
Chaos, 13 (2003) 926-936 |
|
|
| review |
|
|
|
D |
K. Kaneko |
|
|
| title |
|
|
|
1 |
"Prevalence of milnor
attractors and chaotic itinerancy in 'high'-dimensional dynamical
systems" |
|
|
| |
|
|
|
|
in Synchronization: Theory
and Application, II.Math.Phys.Chem. vol.109(2003)65-77, (Kluwer Academic
Publishers) edit.A.Pikovsky, Y.Maistrenko, |
|
|
| review |
A |
|
|
|
K. Kaneko |
|
|
| title |
1 |
|
|
|
"Organization through
Intra-Inter Dynamics" |
|
|
| |
|
|
|
|
in Origination of
Organismal Form: Beyond the Gene in Developmental and Evolutionary Biology
(The Vienna Series in Theoretical Biology) (MIT press, 2003) eds. G. Mueller
and S. Newman |
|
|
| Year 2002 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
|
|
C |
D |
K. Kaneko |
|
|
| title |
|
|
3 |
1 |
"Dominance of Minlnor
attractors in Globally Coupled Dynamical Systems with more than 7 +- 2
degrees of freedom (retitled from `Magic Number 7 +- 2 in Globally Coupled
Dynamical Systems') " |
http://chaos.c.u-tokyo.ac.jp/papers/gcm/magic7.pdf |
|
| |
|
|
|
|
Phys. Rev. E.66, 055201(R) 2002 |
|
|
| paper |
A |
|
|
|
C. Furusawa and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Origin of
Multicellular Organisms as an Inevitable Consequence of Dynamical
Systems" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/astro.pdf |
|
| |
|
|
|
|
Anatomical Record, 268 (2002) 327-342 |
|
|
| paper |
A |
|
|
|
K. Kaneko |
|
|
| title |
4 |
|
|
|
"Symbiotic Sympatric
Speciation: Compliance with Interaction-driven Phenotype Differentiation from
a Single Genotype" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/speciation2002.pdf |
|
| |
|
|
|
|
Population Ecology, 44 (2002) 71-85 |
|
|
| paper |
A |
|
|
|
K. Kaneko |
|
|
| title |
2 |
|
|
|
"Kinetic Origin of
Heredity in a Replicating System with a Catalytic Network" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/yomo02.pdf |
|
| |
|
|
|
|
J. Biol. Phys., 28 (2002) 781-792 |
|
|
| paper |
|
B |
|
|
H. Takagi and K. Kaneko |
|
|
| title |
|
2 |
|
|
"Pattern Dynamics of a
Multi-Component Reaction-Diffusion System:Differentiation of Replicating
Spots" |
http://chaos.c.u-tokyo.ac.jp/papers/others/IJBC02.pdf |
|
| |
|
|
|
|
Int. J. Bifurcation and Chaos, 11 (2002) 2579-2598 |
|
|
| paper |
|
|
|
D |
J. Ito and K. Kaneko |
|
|
| title |
|
|
|
1 |
"Spontaneous structure
formation in a network of chaotic units with variable connection
strengths" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/ito.pdf |
|
| |
|
|
|
|
Phys. Rev. Lett., 88 (2002) 028701-1 |
|
|
| paper |
|
|
|
D |
S. Ishihara and K. Kaneko |
|
|
| title |
|
|
|
3 |
"Simple dynamical
system model of history dependent phenomena" |
http://chaos.c.u-tokyo.ac.jp/papers/cml/ishihara02.pdf |
|
| |
|
|
|
|
J. Phys. Soc. Jpn, 71 (2002) 2357-2360 |
|
|
| paper |
A |
|
|
|
K. Kaneko and T. Yomo |
|
|
| title |
2 |
|
|
|
"On a kinetic origin of
heredity :minority control in replicating molecules" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/yomo01.pdf |
|
| |
|
|
|
|
J. Theor. Biol. 214 (2002) 563-576 (nlin.AO/0105031) |
|
|
| paper |
A |
|
|
|
K. Kaneko and T. Yomo |
|
|
| title |
4 |
|
|
|
"Genetic
Diversification through Interaction-driven Phenotype Differentiation" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/eer02.pdf |
|
| |
|
|
|
|
Evol Eco. Res., 4 (2002) 317-350 |
|
|
| paper |
|
|
C |
|
E. Akiyama and K. Kaneko |
|
|
| title |
|
|
4 |
|
"Dynamical Systems Game
Theory II" |
http://chaos.c.u-tokyo.ac.jp/papers/others/game2.pdf |
|
| |
|
|
|
|
Phsyica D 167 (2002) 36-71 |
|
|
| review |
A |
|
|
D |
K. Kaneko |
|
|
| title |
1 |
|
|
1 |
"From Coupled Dynamical
Systems to Biological Irreversibility" |
|
|
| |
|
|
|
|
Adv. in Chem. Phys. 122 (2002) 53-73 |
|
|
| proceeding |
A |
|
|
|
H. Takagi and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Dynamic Relationship
between Diversity and Plasticity of Cell types in Multi-cellular State" |
|
|
| |
|
|
|
|
Proceedings of the Eighth International Conference of
Artificial Life, 79-88. (2002) |
|
|
| Year 2001 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
A |
|
|
|
C. Furusawa and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Theory of Robustness
of Irreversible Differentiation in a Stem Cell System: Chaos Hypothesis" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/stem.pdf |
|
| |
|
|
|
|
J. Theor. Biol. 209 (2001) 395-416 |
|
|
| paper |
|
B |
|
|
Y. Togashi and K. Kaneko |
|
|
| title |
|
1 |
|
|
"Transitions Induced by
the Discreteness of Molecules in a Small Autocatalytic System" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/togashi.pdf |
|
| |
|
|
|
|
Phys. Rev. Lett., 86 (2001) 2459-2462 |
|
|
| paper |
|
B |
|
D |
N. Nakagawa and K. Kaneko |
|
|
| title |
|
3 |
|
2 |
"Relaxation, the
Boltzmann-Jeans Conjecture and Chaos" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/bj.pdf |
|
| |
|
|
|
|
Phys. Rev. E 64., (2001) 055205®-209 |
|
|
| paper |
|
|
C |
|
Y. Takahashi, N. Kataoka, K.
Kaneko, and T. Namiki |
|
|
| title |
|
|
2 |
|
"Function
Dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/others/kataoka-jjam.pdf |
|
| |
|
|
|
|
Jap. J. J. Appl. Math., 18 (2001) 405-423 |
|
|
| paper |
|
B |
|
|
H. Takagi and K. Kaneko |
|
|
| title |
|
2 |
|
|
"Differentiation and
Replication of Spots in a Reaction Diffusion System with Many Chemicals" |
http://chaos.c.u-tokyo.ac.jp/papers/others/EPL01.pdf |
|
| |
|
|
|
|
Europhys. Lett. 56 (2001) 145-151 |
|
|
| paper |
|
|
C |
|
Naoto Kataoka and Kunihiko Kaneko |
|
|
| title |
|
|
2 |
|
"Functional Dynamics
II: Syntactic structure" |
http://chaos.c.u-tokyo.ac.jp/papers/others/kataoka01.pdf |
|
| |
|
|
|
|
Phsyica D 149 (2001) 174-196 |
|
|
| paper |
|
|
C |
|
A. Saito and K. Kaneko |
|
|
| title |
|
|
5 |
|
"Inaccessibility and
Undecidability in Computation, Geometry and Dynamical Systems" |
http://chaos.c.u-tokyo.ac.jp/papers/others/saito.pdf |
|
| |
|
|
|
|
Physica D 155 (2001) 1-33 |
|
|
| paper |
|
|
|
D |
Koichi Fujimoto and Kunihiko
Kaneko |
|
|
| title |
|
|
|
3 |
"Sensitive boundary
condition dependence of noise-sustained structure" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/fuji.pdf |
|
| |
|
|
|
|
Phys. Rev. E. 63 (2001) 036128 |
|
|
| Book |
|
|
|
|
K. Kaneko and I. Tsuda |
|
|
| title |
|
|
|
|
Complex Systems: Chaos and
Beyond |
http://www.amazon.com/dp/3540672028/ |
|
| |
|
|
|
|
Springer 2001 |
|
|
| Year 2000 |
|
| type |
theme |
author, title,
journal, volume, page, year |
PDF |
|
| paper |
A |
|
|
|
C. Furusawa and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Complex Orgnization in
multicullarity as a necessity in evolution" |
http://chaos.c.u-tokyo.ac.jp/study/~furusawa/research/alife2.pdf |
|
| |
|
|
|
|
Artificial Life, 6(2000) 265-281 |
|
|
| paper |
A |
|
|
|
H. Takagi, K. Kaneko, and T. Yomo |
|
|
| title |
4 |
|
|
|
"Evolution of genetic
code through isologous diversification of cellular states" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/takagi.pdf |
|
| |
|
|
|
|
Artificial Life 6(2000) 283-305 |
|
|
| paper |
|
B |
|
D |
N. Nakagawa, K. Kaneko and T.S.
Komatsu |
|
|
| title |
|
3 |
|
2 |
"Long-term Relaxation
of a Composite System in Partial Contact with a Heat Bath" |
http://chaos.c.u-tokyo.ac.jp/papers/others/nakagawa00.pdf |
|
| |
|
|
|
|
J. Phys. Soc. Jpn, 69 (2000) 3214-3222 |
|
|
| paper |
|
|
C |
|
Naoto Kataoka, Kunihiko Kaneko |
|
|
| title |
|
|
2 |
|
"Natural language from
functional dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/others/kataoka-BS2000.pdf |
|
| |
|
|
|
|
Biosystems 57 (2000) 1-11 |
|
|
| paper |
A |
|
|
|
Kunihiko Kaneko and Tetsuya Yomo |
|
|
| title |
4 |
|
|
|
"Sympatric Speciation:
compliance with phenotype diversification from a single genotype" |
http://chaos.c.u-tokyo.ac.jp/papers/bio1/yomo00.pdf |
|
| |
|
|
|
|
Proc. Roy. Soc. B, 267
(2000) 2367-2373 |
|
|
| paper |
|
|
C |
|
Naoto Kataoka and Kunihiko Kaneko |
|
|
| title |
|
|
2 |
|
"Functional Dynamics I
: Articulation Process" |
http://chaos.c.u-tokyo.ac.jp/papers/others/kataoka00.pdf |
|
| |
|
|
|
|
Physica D 138 (2000)
225-250 |
|
|
| paper |
A |
|
|
|
C. Furusawa and K. Kaneko |
|
|
| title |
1 |
|
|
|
"Origin of complexity
in multicellular organisms" |
http://chaos.c.u-tokyo.ac.jp/papers/pr/furusawa00.pdf |
|
| |
|
|
|
|
Phys. Rev. Lett. 84 (2000)
6130-6133 |
|
|
| paper |
|
B |
|
D |
Naoko Nakagawa and Kunihiko Kaneko |
|
|
| title |
|
3 |
|
2 |
"Energy Storage in a
Hamiltonian System in Partial Contact with a Heat Bath" |
http://chaos.c.u-tokyo.ac.jp/papers/hamil/nakagawa00.pdf |
|
| |
|
|
|
|
J. Phys. Soc. Jpn. 69
(2000) 1255-1258 |
|
|
| paper |
|
|
|
D |
Junji Ito and Kunihiko Kaneko |
|
|
| title |
|
|
|
1 |
"Self-organized
hierarchical structure in a plastic network of chaotic units" |
http://arXiv.org/abs/cond-mat/9911416 |
|
| |
|
|
|
|
Neural Networks, 13 (2000)
275-281 |
|
|
| paper |
|
|
C |
|
Eizo Akiyama, Kunihiko Kaneko |
|
|
| title |
|
|
4 |
|
"Dynamical Systems Game
Theory and Dynamics of Games" |
http://chaos.c.u-tokyo.ac.jp/papers/others/game.pdf |
|
| |
|
|
|
|
Physica D 147 (2000)
221-258 |
|
|
| paper |
A |
|
|
|
Kunihiko Kaneko and Chikara
Furusawa |
|
|
| title |
1 |
|
|
|
"Robust and
Irreversible Development in Cell Society as a General Consequence of
Intra-Inter Dynamics" |
http://chaos.c.u-tokyo.ac.jp/papers/others/furusawa00.pdf |
|
| |
|
|
|
|
Physica A 280 (2000) 22-33 |
|
|
| paper |
|
|
|
D |
N.B. Ouchi and K. Kaneko |
|
|
| title |
|
|
|
1 |
"Coupled Map with Local
and Global interactions" |
|
|
| |
|
|
|
|
Chaos 10 (2000) 359-365 |
|
|
| review |
A |
|
|
|
M.A. Bedau, J.S. McCaskill, N.H.
Packard, S. Rasmussen, C. Adami, D.G.Green, T. Ikegami, K. Kaneko, and. T.S.
Ray |
|
|
| title |
5 |
|
|
|
"Open Problems in
Artificial Life" |
|
|
| |
|
|
|
|
Artificial Life 6 (2000) 363-376 |
|
|
| proceeding |
|
B |
|
|
A. Saito and K. Kaneko |
|
|
| title |
|
5 |
|
|
"Inaccessibility in
Decision Procedures" |
|
|
| |
|
|
|
|
in Unconventional Models of Computation" UMC'2K,
edited by I. Antoniou et al., Springer, London, 215-233 (2000) |
|
|
| proceeding |
A |
|
|
|
Kunihiko Kaneko and Tetsuya Yomo |
|
|
| title |
4 |
|
|
|
"Sympatric Speciation
from Interaction-induced Phenotype Differentiation" |
|
|
| |
|
|
|
|
Proceedings of the Artificial Life VII conference, MIT
press (Bedau et al. ed., 2000) 113-121 |
|
|
| proceeding |
A |
|
|
|
Chikara Furusawa and Kunihiko
Kaneko |
|
|
| title |
1 |
|
|
|
"Complex organization
in multicellularity as a necessity in evolution" |
|
|
| |
4 |
|
|
|
Proceeding of the Artificial Life VII conference, MIT
press(Bedau et al. ed., 2000) 103-112 |
|
|
| proceeding |
A |
|
|
|
Hiroaki Takagi and Kunihiko Kaneko |
|
|
| title |
1 |
|
|
|
"Evolution of genetic
code through isologous diversification of cellular states" |
|
|
| |
4 |
|
|
|
Proceedings of the Artificial Life VII conference, MIT
press(Bedau et al. ed., 2000) 122-131 |
|
|
| proceeding |
|
|
C |
|
Eizo Akiyama, Kunihiko Kaneko |
|
|
| title |
|
|
4 |
|
"Social Dilemma and
Dynamical Systems Game" |
|
|
| |
|
|
|
|
Proceedings of the Artificial Life VII conference, MIT
press(Bedau et al. ed., 2000) 186-195 |
|
|
|
|
|
|
|
|
|
|